4 files changed, 42 insertions, 16 deletions
diff --git a/swig/java/Makefile.am b/swig/java/Makefile.am
index 25452a1..09a7bfc 100644
--- a/swig/java/Makefile.am
+++ b/swig/java/Makefile.am
@@ -30,6 +30,8 @@ javasources = \
 	xtract_unit_t.java \
 	xtract_vector_t.java \
 	xtract_window_types_.java 
+
+
 	
 javaclasses = \
 	floatArray.class \
@@ -63,6 +65,8 @@ javaclasses = \
 	xtract_vector_t.class \
 	xtract_window_types_.class 
 	
+nonautojavasources = SWIG.java
+nonautojavaclasses = SWIG.class
 
 #javasources = \
 #	xtractJNI.java \
@@ -81,26 +85,28 @@ javaclasses = \
 MAINTAINERCLEANFILES = $(javasources) Makefile.in
 
 BUILT_SOURCES = $(srcdir)/xtract_wrap.c
-SWIG_SOURCES = ../xtract.i
+SWIG_SOURCES = jxtract.i
 
 lib_LTLIBRARIES = libjxtract.la
 libjxtract_la_SOURCES = $(srcdir)/xtract_wrap.c $(SWIG_SOURCES)
 libjxtract_la_CFLAGS = $(SWIG_PYTHON_CPPFLAGS) -I$(top_srcdir)/src
-libjxtract_la_LDFLAGS = -module -lxtract
+libjxtract_la_LDFLAGS = -lxtract
 libjxtract_la_LIBADD = $(top_srcdir)/src/libxtract.la
 
 SWIG_JAVA_OPT = -java -package xtract.core
 
 xtract_wrap.c : $(SWIG_SOURCES)
 	$(SWIG) $(SWIG_JAVA_OPT) -I$(top_srcdir) -o $@ $<
-	$(JAVAC) $(javasources)
+	$(JAVAC) $(nonautojavasources) $(javasources)
 	mkdir -p xtract/core
 	mkdir -p xtract/core/src
 	mv $(javasources) xtract/core/src
 	mv $(javaclasses) xtract/core
+	cp $(nonautojavasources) xtract/core/src
+	cp $(nonautojavaclasses) xtract/core
 	$(JAVAC) test.java
 
 clean-local:
-	-rm -f libjxtract.so xtract_wrap.c $(javasources) $(javaclasses) test.class
+	-rm -f libjxtract.so xtract_wrap.c $(javasources) $(javaclasses) $(nonautojavaclasses) test.class
 	-rm -rf xtract
 
diff --git a/swig/java/SWIG.java b/swig/java/SWIG.java
new file mode 100644
index 0000000..0d6c47b
--- /dev/null
+++ b/swig/java/SWIG.java
@@ -0,0 +1,16 @@
+package xtract.core;
+
+public abstract class SWIG {
+  protected abstract long getPointer();
+
+  public boolean equals(Object obj) {
+    boolean equal = false;
+    if (obj instanceof SWIG)
+      equal = (((SWIG)obj).getPointer() == this.getPointer());
+    return equal;
+  }
+  
+  public SWIGTYPE_p_void getVoidPointer() {
+    return new SWIGTYPE_p_void(getPointer(), false);
+  }
+}
diff --git a/swig/java/jxtract.i b/swig/java/jxtract.i
new file mode 100644
index 0000000..14b9727
--- /dev/null
+++ b/swig/java/jxtract.i
@@ -0,0 +1,3 @@
+
+%include "arrays_java.i"
+%include "../xtract.i"
diff --git a/swig/java/test.java b/swig/java/test.java
index 8949826..ac393a5 100644
--- a/swig/java/test.java
+++ b/swig/java/test.java
@@ -10,32 +10,33 @@ public class test {
 	catch (UnsatisfiedLinkError e) {
 	    System.out.println("Failed to load the library \"jxtract\"");
 	    System.out.println(e.toString());
+            System.exit(0);
 	}
 
 	System.out.println("\nRunning libxtract Java bindings test...\n");
 
         int len = 5;
         int retval = 0;
-        float result[];
-        floatArray a = new floatArray(len);
-        SWIGTYPE_p_void myvoid = null;
-
-        result = new float[1];
+        float mean[] = new float[1];
+        float variance[] = new float[1];
+        float[] a = new float[len];
+        floatArray av = new floatArray(1);
+        variance = new float[1];
 
 	System.out.print("The mean of: ");
 
         for (int i = 0; i < len; i++){
-	    System.out.print(i * 2 + ", ");
-            a.setitem(i, i * 2);
+	    System.out.print(i * 3 + ", ");
+            a[i] = i * 3;
 	}
 
-	System.out.print("is: ");
-
-        retval = xtract.xtract_mean(a.cast(), len, myvoid, result);
+        retval = xtract.xtract_mean(a, len, av.cast().getVoidPointer(), mean);
 
-        System.out.print(result[0] + "\n");
+        System.out.print("is " + mean[0] + "\n");
 
-	System.out.println("\nFinished!\n\n");
+        av.setitem(0, mean[0]);
+        retval = xtract.xtract_variance(a, len, av.cast().getVoidPointer(), variance);
+        System.out.print("The variance is: " + variance[0] + "\n");
 
     }
 }